Van Quynh Thi Truong

Van Quynh Thi Truong

a true side quest queen

Hi, I'm Van Quynh! You can call me Van or Van QT for short. I'm a scientist and artist who's spent over a decade across academia, government, and industry. Outside of work, I surf, rock climb, mountain bike, make crowdsourced sculptures, community-build, and once bike toured across the United States. Born in rural Vietnam, raised in Florida, currently in Philadelphia.

This site is my attempt to collect all of my side quests into one pretty fun place, sorted by whichever hat I'm wearing. Pick one above to see what's underneath.

News

Recent updates across hats.

2026

  • May — Awarded the Advanced Scientific Computing Certificate from the UPenn School of Engineering & Applied Science.
  • April — Played on Craft Women's Team at South Africa's Nationals Competition for Ultimate Frisbee.
  • Late March — Briefly donned my "Professor Van" hat & gave a guest lecture, "Part II: Contemporary Thoughts on 'Ethnicity'," to Prof. Fred Dickinson's Pacific Worlds: Vietnam course.
  • Mid-March — Played on Craft Women's Team at Regionals Ultimate Frisbee Competition, advancing to Nationals!
  • March — My paper, "Prompt injection of OpenAI custom GPTs leaks informatics secrets," accepted for a talk at the American Medical Informatics Association's (AMIA) 2026 Amplify Informatics Conference in Denver, CO.
  • Late February — Invited to join the 2026 Organizing Committee for the Trustworthy AI for Social Good Workshop at ICML in Seoul, Korea.
  • February — My bioinformatics "Eras Tour" paper was accepted in the 25th Anniversary edition of Briefings in Bioinformatics (in press).
  • Late January — Started my AI residency in Cape Town, South Africa, supported by the inaugural Cooperative AI Research Fellowship. Among the top 1% of applicants globally.
  • January — Finishing up final tasks to publish my remaining thesis projects.
  • Early January — Our hackathon preprint is live: "A blueprint for open science: how transatlantic teams built and deployed knowledge graphs to enable biological (AI) models".

2025

  • Late December — Presented our LLM tool-calling benchmark results at the IEEE BIBM International Conference on Bioinformatics & Biomedicine in Wuhan, China. Supported by GAPSA PGLA and Penn's Biomedical Graduate Studies Travel Funds.
  • Mid-December — Invited to join the 2026 Organizing Committee for the Bioinformatics Open Source Conference (BOSC).
  • Early December — Successfully defended my PhD dissertation, "Artificial Intelligence Strategies for Advancing Bioinformatics Infrastructure and Ecosystems," at the University of Pennsylvania.
  • Early November — Awarded the President Gutmann Leadership Award by the Penn Graduate and Professional Student Assembly.
  • Late October — Invited to submit to a special issue of Future Generation Computer Systems (FGCS) Journal.
  • Early October — Gave a session talk, "ToolsyBio: LLM Retrieval for Conversational Bioinformatics Tool Discovery," at the US Research Software Engineering (USRSE) Association's annual conference in Philadelphia, PA. Supported by the Ritchie Lab.
  • August — Invited to submit to the Special 25th Anniversary Collection in Briefings in Bioinformatics.
  • June — My paper, "ToolsyBio: A retrieval-augmented generation system for navigating the bioinformatics software landscape," was accepted for a talk and the Proceedings of the 3rd Annual Conference of the US Research Software Engineer Association (USRSE'25), Philadelphia, PA.
  • May–November — Invited to join the Women in HPC (WHPC) Workshop Organizing Committee.
  • March–May — Invited to join the 2025 Review Committee for the Bioinformatics Open Source Conference (BOSC).
  • Late January — Our hackathon team won 1st place for our AI agent project at the Immune Health Hackathon.
  • Early January — Completed all requirements and submitted my MA thesis, "A Statistical Exploration of Large Language Models: Evolution, Challenges, and Global Concerns," to the Wharton Department of Statistics and Data Science.

2024

  • December — Exhibited my painterly relief textile sculpture, "Dear A.I., Please Help Me Fill In My Village Memories," at the Resource Exchange's ReCreate Gallery (Dec 9, 2024 – Feb 26, 2025).
  • August–October — Lived in Vietnam for 3 months setting up a cross-cultural qualitative study on Vietnam's AI, bioinformatics, and digital infrastructure.
  • August — Presented interim results with my team at the AI for Health Equity Symposium / AIM-AHEAD Annual Meeting in Atlanta, GA.
  • Mid-May — Awarded the inaugural Penn Global Dissertation Grant by the Offices of the Vice Provosts for Global Initiatives and Education.
  • Early May — After a competitive selection process among 500 art pieces and 130 artists, my AI art piece was among the chosen for the yearlong "2024–2025 Celebration of Art and Life Exhibition" at the Perelman Center for Advanced Medicine. Unfortunately, due to framing cost constraints, I had to withdraw the artwork.
  • April — Exhibited my AI art piece in the final exhibition for the "AI in Art" course at the University of Pennsylvania's Stuart Weitzman Hall Lobby.
  • February — Began the Traineeship in Advanced Data Analysis hosted by the NIH AIM-AHEAD and NCATS Programs for underrepresented AI/ML researchers.
  • January — My application to the Fulbright-National Geographic Award Program advanced to Semi-Finalist status.

2023

  • December — Presented my research at the NeurIPS AI4Science Workshop.
  • November — Accepted the ACM SIGHPC Award onstage at SC23 in Denver, CO, which drew over 13,000 attendees in the computing field.
  • September — Selected for the Perry World House Global Affairs Graduate Associates Program.
  • August — Awarded the inaugural Graduate Leadership and Engagement Award at the Penn Genomics & Computational Biology (GCB) Graduate Group and Institute for Biomedical Informatics (IBI) Annual Retreat in the Poconos, PA.
  • August — Invited to join the organizing team for the 2024 London Geometry and Machine Learning Summer School (LOGML).
  • July — 1 of 6 awarded the 2023 ACM SIGHPC Computational and Data Science Fellowship globally.
  • June — Invited to join the organizing team for the 2023 Machine Learning for Health (ML4H) Symposium.
  • June — Started an internship at Eli Lilly & Company at the Lilly Biotechnology Center in San Diego, CA.
  • May — Invited to attend the Symposium on Artificial Intelligence in Learning Health Systems (SAIL). Travel supported by the Ritchie Lab and Penn's Biomedical Graduate Studies Career Development Fund.
  • February — Attended the 6-Day Stillpond Computational Cytometry Data Analysis Workshop.

2022

  • November — My 1st first-author publication is in press: "Quality Control Procedures for Genome-Wide Association Studies" (code).
  • October — 1 of 36 awarded the 2022 Microsoft Research PhD Fellowship globally (Penn GSC announcement).
  • September — Submitted our chapter for review in the Current Protocols for Human Genetics Journal.
  • August — Awarded the Excedr Travel Grant to attend the inaugural Nucleate Summit in Boston, MA.
  • August — Abstract accepted at the American Society for Human Genetics Conference in Los Angeles, CA.
  • July — Attended the Federation of Clinical Immunology Societies (FOCiS) Annual Meeting in San Francisco, CA. Systems Immunology Course & Big Data in Immunology Course.
  • June — Became a dual-degree PhD/MA Candidate with Penn Perelman School of Medicine and the Wharton School of Business.
  • May — Successfully passed the Genomics & Computational Biology PhD Candidacy Exams.
  • April — Invited Speaker at the 2022 Catalyzing Change: Curriculum to Career, Building a Diverse and Equitable STEM Talent Pipeline.
  • January — Abstract accepted at the Pacific Symposium on Biocomputing in Kona, Hawai'i.

2021

2020

  • August — Inducted into the Fontaine Society with PhD training support from the Fontaine PhD Fellowship, awarded by the University of Pennsylvania to support PhD students from underrepresented backgrounds.
  • Late May — Graduated from Johns Hopkins with my MS in Biotechnology with concentrations in Bioinformatics and Molecular Targets & Drug Discovery.
  • Mid-May — Published a paper in Nature Communications: "Dissociable Neural Correlates of Uncertainty Underlie Different Exploration Strategies".

📱 More.. soon. This site is a work in progress.